Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cops6O88545 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.91■□□□□ 0.3
Cops6O88545 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cops6O88545 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.91■□□□□ 0.3
Cops6O88545 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cops6O88545 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.91■□□□□ 0.3
Cops6O88545 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cops6O88545 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Cops6O88545 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.91■□□□□ 0.3
Cops6O88545 Gm27731-201ENSMUST00000185192 107 ntBASIC16.91■□□□□ 0.3
Cops6O88545 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.91■□□□□ 0.3
Cops6O88545 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cops6O88545 Gm18473-201ENSMUST00000220543 868 ntBASIC16.91■□□□□ 0.3
Cops6O88545 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.91■□□□□ 0.3
Cops6O88545 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cops6O88545 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.91■□□□□ 0.3
Cops6O88545 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.91■□□□□ 0.3
Cops6O88545 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Cops6O88545 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops6O88545 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cops6O88545 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Cops6O88545 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.9■□□□□ 0.3
Cops6O88545 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.9■□□□□ 0.3
Cops6O88545 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.9■□□□□ 0.3
Cops6O88545 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.9■□□□□ 0.3
Cops6O88545 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.9■□□□□ 0.3
Cops6O88545 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.9■□□□□ 0.3
Cops6O88545 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.9■□□□□ 0.3
Cops6O88545 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.9■□□□□ 0.3
Cops6O88545 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cops6O88545 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.9■□□□□ 0.3
Cops6O88545 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.9■□□□□ 0.3
Cops6O88545 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Cops6O88545 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cops6O88545 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops6O88545 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cops6O88545 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cops6O88545 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Cops6O88545 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.89■□□□□ 0.29
Cops6O88545 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cops6O88545 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.89■□□□□ 0.29
Cops6O88545 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.89■□□□□ 0.29
Cops6O88545 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.89■□□□□ 0.29
Cops6O88545 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.89■□□□□ 0.29
Cops6O88545 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.89■□□□□ 0.29
Cops6O88545 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 Gm45841-201ENSMUST00000207700 164 ntBASIC16.89■□□□□ 0.29
Cops6O88545 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.89■□□□□ 0.29
Cops6O88545 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.89■□□□□ 0.29
Cops6O88545 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cops6O88545 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cops6O88545 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops6O88545 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms