Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.85□□□□□ -0.35
Cops4O88544 Gm37230-201ENSMUST00000194491 818 ntBASIC12.85□□□□□ -0.35
Cops4O88544 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.85□□□□□ -0.35
Cops4O88544 Gm10154-201ENSMUST00000084445 354 ntBASIC12.85□□□□□ -0.35
Cops4O88544 Rubie-203ENSMUST00000227803 2430 ntBASIC12.85□□□□□ -0.35
Cops4O88544 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cops4O88544 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.84□□□□□ -0.35
Cops4O88544 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cops4O88544 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.84□□□□□ -0.35
Cops4O88544 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Gm13597-201ENSMUST00000121239 375 ntBASIC12.84□□□□□ -0.35
Cops4O88544 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cops4O88544 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Gm2272-201ENSMUST00000194903 582 ntBASIC12.84□□□□□ -0.35
Cops4O88544 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Gm7461-201ENSMUST00000058918 827 ntBASIC12.84□□□□□ -0.35
Cops4O88544 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cops4O88544 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.84□□□□□ -0.35
Cops4O88544 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.84□□□□□ -0.35
Cops4O88544 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.84□□□□□ -0.35
Cops4O88544 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cops4O88544 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cops4O88544 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Cops4O88544 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cops4O88544 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.84□□□□□ -0.35
Cops4O88544 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cops4O88544 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cops4O88544 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cops4O88544 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cops4O88544 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Cops4O88544 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cops4O88544 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cops4O88544 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Cops4O88544 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cops4O88544 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cops4O88544 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.83□□□□□ -0.36
Cops4O88544 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.83□□□□□ -0.36
Cops4O88544 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.83□□□□□ -0.36
Cops4O88544 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.83□□□□□ -0.36
Cops4O88544 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.83□□□□□ -0.36
Cops4O88544 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.83□□□□□ -0.36
Cops4O88544 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.83□□□□□ -0.36
Cops4O88544 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.83□□□□□ -0.36
Cops4O88544 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.83□□□□□ -0.36
Cops4O88544 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cops4O88544 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops4O88544 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.83□□□□□ -0.36
Cops4O88544 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms