Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.29□□□□□ -0.28
Vti1bO88384 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Vti1bO88384 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.29□□□□□ -0.28
Vti1bO88384 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.29□□□□□ -0.28
Vti1bO88384 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.28□□□□□ -0.28
Vti1bO88384 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.28□□□□□ -0.28
Vti1bO88384 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Gm23935-201ENSMUST00000102303 57 ntBASIC13.28□□□□□ -0.28
Vti1bO88384 Gm24270-201ENSMUST00000102326 57 ntBASIC13.28□□□□□ -0.28
Vti1bO88384 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.28□□□□□ -0.28
Vti1bO88384 Gm24245-201ENSMUST00000157318 57 ntBASIC13.28□□□□□ -0.28
Vti1bO88384 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.28□□□□□ -0.28
Vti1bO88384 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.28□□□□□ -0.28
Vti1bO88384 Gm38225-201ENSMUST00000194001 393 ntBASIC13.28□□□□□ -0.28
Vti1bO88384 Gm44335-201ENSMUST00000196879 141 ntBASIC13.28□□□□□ -0.28
Vti1bO88384 Gm44297-201ENSMUST00000198304 141 ntBASIC13.28□□□□□ -0.28
Vti1bO88384 Gm44346-201ENSMUST00000198851 141 ntBASIC13.28□□□□□ -0.28
Vti1bO88384 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Vti1bO88384 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.28□□□□□ -0.28
Vti1bO88384 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.28□□□□□ -0.28
Vti1bO88384 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Vti1bO88384 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vti1bO88384 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.28□□□□□ -0.28
Vti1bO88384 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1bO88384 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vti1bO88384 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vti1bO88384 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vti1bO88384 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vti1bO88384 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Vti1bO88384 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vti1bO88384 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Vti1bO88384 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vti1bO88384 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vti1bO88384 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Vti1bO88384 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.27□□□□□ -0.29
Vti1bO88384 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.27□□□□□ -0.29
Vti1bO88384 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.27□□□□□ -0.29
Vti1bO88384 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.27□□□□□ -0.29
Vti1bO88384 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.27□□□□□ -0.29
Vti1bO88384 Gm37230-201ENSMUST00000194491 818 ntBASIC13.27□□□□□ -0.29
Vti1bO88384 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vti1bO88384 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 228.5 ms