Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfdp1O88271 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.33■□□□□ 0.36
Cfdp1O88271 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfdp1O88271 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.33■□□□□ 0.36
Cfdp1O88271 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfdp1O88271 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cfdp1O88271 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfdp1O88271 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfdp1O88271 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.32■□□□□ 0.36
Cfdp1O88271 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cfdp1O88271 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Gm12490-201ENSMUST00000120255 560 ntBASIC17.32■□□□□ 0.36
Cfdp1O88271 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.32■□□□□ 0.36
Cfdp1O88271 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.32■□□□□ 0.36
Cfdp1O88271 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Gm8515-201ENSMUST00000194852 576 ntBASIC17.32■□□□□ 0.36
Cfdp1O88271 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.32■□□□□ 0.36
Cfdp1O88271 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.32■□□□□ 0.36
Cfdp1O88271 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cfdp1O88271 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfdp1O88271 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.32■□□□□ 0.36
Cfdp1O88271 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cfdp1O88271 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.31■□□□□ 0.36
Cfdp1O88271 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.31■□□□□ 0.36
Cfdp1O88271 Mir698-201ENSMUST00000102164 109 ntBASIC17.31■□□□□ 0.36
Cfdp1O88271 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cfdp1O88271 Gm12341-201ENSMUST00000119724 503 ntBASIC17.31■□□□□ 0.36
Cfdp1O88271 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.31■□□□□ 0.36
Cfdp1O88271 Gm9908-201ENSMUST00000211534 448 ntBASIC17.31■□□□□ 0.36
Cfdp1O88271 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cfdp1O88271 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.31■□□□□ 0.36
Cfdp1O88271 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cfdp1O88271 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Cfdp1O88271 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.31■□□□□ 0.36
Cfdp1O88271 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Cfdp1O88271 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cfdp1O88271 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Cfdp1O88271 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Cfdp1O88271 Gm7653-201ENSMUST00000214567 508 ntBASIC17.3■□□□□ 0.36
Cfdp1O88271 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.3■□□□□ 0.36
Cfdp1O88271 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.3■□□□□ 0.36
Cfdp1O88271 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cfdp1O88271 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfdp1O88271 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfdp1O88271 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfdp1O88271 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfdp1O88271 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cfdp1O88271 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cfdp1O88271 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.29■□□□□ 0.36
Cfdp1O88271 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfdp1O88271 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cfdp1O88271 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cfdp1O88271 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms