Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.1□□□□□ -0.31
Cx3cl1O35188 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.1□□□□□ -0.31
Cx3cl1O35188 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.1□□□□□ -0.31
Cx3cl1O35188 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.09□□□□□ -0.31
Cx3cl1O35188 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Gm4875-201ENSMUST00000118257 786 ntBASIC13.09□□□□□ -0.31
Cx3cl1O35188 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.09□□□□□ -0.31
Cx3cl1O35188 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cx3cl1O35188 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cx3cl1O35188 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cx3cl1O35188 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cx3cl1O35188 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Cx3cl1O35188 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cx3cl1O35188 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cx3cl1O35188 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cx3cl1O35188 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.08□□□□□ -0.32
Cx3cl1O35188 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Gm12585-201ENSMUST00000117307 290 ntBASIC13.08□□□□□ -0.32
Cx3cl1O35188 Gm15393-201ENSMUST00000120499 219 ntBASIC13.08□□□□□ -0.32
Cx3cl1O35188 Gm15487-201ENSMUST00000122373 465 ntBASIC13.08□□□□□ -0.32
Cx3cl1O35188 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.08□□□□□ -0.32
Cx3cl1O35188 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.08□□□□□ -0.32
Cx3cl1O35188 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms