Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Bhlhe40O35185 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.66□□□□□ -0.22
Bhlhe40O35185 Gm15806-201ENSMUST00000120696 955 ntBASIC13.66□□□□□ -0.22
Bhlhe40O35185 Gm15376-201ENSMUST00000122258 783 ntBASIC13.66□□□□□ -0.22
Bhlhe40O35185 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Gm43433-201ENSMUST00000196573 481 ntBASIC13.66□□□□□ -0.22
Bhlhe40O35185 Gm19078-201ENSMUST00000206311 727 ntBASIC13.66□□□□□ -0.22
Bhlhe40O35185 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.66□□□□□ -0.22
Bhlhe40O35185 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Bhlhe40O35185 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Bhlhe40O35185 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.65□□□□□ -0.22
Bhlhe40O35185 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Gm24420-201ENSMUST00000176676 59 ntBASIC13.65□□□□□ -0.22
Bhlhe40O35185 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Bhlhe40O35185 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.64□□□□□ -0.23
Bhlhe40O35185 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Bhlhe40O35185 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.64□□□□□ -0.23
Bhlhe40O35185 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Bhlhe40O35185 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Bhlhe40O35185 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Bhlhe40O35185 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Bhlhe40O35185 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Bhlhe40O35185 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Bhlhe40O35185 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.64□□□□□ -0.23
Bhlhe40O35185 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Bhlhe40O35185 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Bhlhe40O35185 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Bhlhe40O35185 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.64□□□□□ -0.23
Bhlhe40O35185 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms