Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm11745-201ENSMUST00000121669 448 ntBASIC16.55■□□□□ 0.24
Hdac1O09106 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.55■□□□□ 0.24
Hdac1O09106 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Hdac1O09106 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Hdac1O09106 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hdac1O09106 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac1O09106 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.55■□□□□ 0.24
Hdac1O09106 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac1O09106 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac1O09106 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac1O09106 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hdac1O09106 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.54■□□□□ 0.24
Hdac1O09106 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.54■□□□□ 0.24
Hdac1O09106 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Gm12260-201ENSMUST00000122447 411 ntBASIC16.54■□□□□ 0.24
Hdac1O09106 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.54■□□□□ 0.24
Hdac1O09106 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.54■□□□□ 0.24
Hdac1O09106 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Hdac1O09106 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Hdac1O09106 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.54■□□□□ 0.24
Hdac1O09106 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac1O09106 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.53■□□□□ 0.24
Hdac1O09106 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.53■□□□□ 0.24
Hdac1O09106 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Hdac1O09106 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.53■□□□□ 0.24
Hdac1O09106 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.53■□□□□ 0.24
Hdac1O09106 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Mir497b-201ENSMUST00000093601 125 ntBASIC16.53■□□□□ 0.24
Hdac1O09106 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.53■□□□□ 0.24
Hdac1O09106 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hdac1O09106 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.53■□□□□ 0.24
Hdac1O09106 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Hdac1O09106 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hdac1O09106 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.53■□□□□ 0.24
Hdac1O09106 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac1O09106 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.52■□□□□ 0.24
Hdac1O09106 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hdac1O09106 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Hdac1O09106 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac1O09106 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Hdac1O09106 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Hdac1O09106 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac1O09106 Ssr1-203ENSMUST00000225246 1825 ntBASIC16.52■□□□□ 0.24
Hdac1O09106 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac1O09106 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac1O09106 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac1O09106 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.52■□□□□ 0.24
Hdac1O09106 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac1O09106 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hdac1O09106 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac1O09106 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac1O09106 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hdac1O09106 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.52■□□□□ 0.24
Hdac1O09106 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac1O09106 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac1O09106 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac1O09106 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac1O09106 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac1O09106 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac1O09106 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac1O09106 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac1O09106 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac1O09106 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms