Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Mir7085-201ENSMUST00000184353 66 ntBASIC14.46□□□□□ -0.09
Ebf3O08791 Gm6266-201ENSMUST00000203844 806 ntBASIC14.46□□□□□ -0.09
Ebf3O08791 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.46□□□□□ -0.09
Ebf3O08791 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.46□□□□□ -0.09
Ebf3O08791 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.46□□□□□ -0.09
Ebf3O08791 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ebf3O08791 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.46□□□□□ -0.09
Ebf3O08791 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ebf3O08791 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ebf3O08791 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Ebf3O08791 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ebf3O08791 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ebf3O08791 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ebf3O08791 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ebf3O08791 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ebf3O08791 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Gm12882-201ENSMUST00000121696 517 ntBASIC14.45□□□□□ -0.1
Ebf3O08791 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.45□□□□□ -0.1
Ebf3O08791 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.45□□□□□ -0.1
Ebf3O08791 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ebf3O08791 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.45□□□□□ -0.1
Ebf3O08791 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.45□□□□□ -0.1
Ebf3O08791 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ebf3O08791 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ebf3O08791 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf3O08791 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.44□□□□□ -0.1
Ebf3O08791 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.44□□□□□ -0.1
Ebf3O08791 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.44□□□□□ -0.1
Ebf3O08791 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.44□□□□□ -0.1
Ebf3O08791 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Ebf3O08791 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.44□□□□□ -0.1
Ebf3O08791 Gm17150-201ENSMUST00000165577 381 ntBASIC14.44□□□□□ -0.1
Ebf3O08791 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.44□□□□□ -0.1
Ebf3O08791 Gm9002-201ENSMUST00000178437 499 ntBASIC14.44□□□□□ -0.1
Ebf3O08791 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.44□□□□□ -0.1
Ebf3O08791 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.44□□□□□ -0.1
Ebf3O08791 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Ebf3O08791 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ebf3O08791 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf3O08791 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms