Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3727J3QM54 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm3727J3QM54 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.81□□□□□ -0.52
Gm3727J3QM54 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm3727J3QM54 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3727J3QM54 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Gm3727J3QM54 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3727J3QM54 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.8□□□□□ -0.52
Gm3727J3QM54 Gm12644-201ENSMUST00000119935 606 ntBASIC11.8□□□□□ -0.52
Gm3727J3QM54 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Gm45747-201ENSMUST00000212203 999 ntBASIC11.8□□□□□ -0.52
Gm3727J3QM54 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.8□□□□□ -0.52
Gm3727J3QM54 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3727J3QM54 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Gm4535-201ENSMUST00000182274 558 ntBASIC11.79□□□□□ -0.52
Gm3727J3QM54 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Gm45098-201ENSMUST00000207179 657 ntBASIC11.79□□□□□ -0.52
Gm3727J3QM54 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Gm10355-201ENSMUST00000097146 517 ntBASIC11.79□□□□□ -0.52
Gm3727J3QM54 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.79□□□□□ -0.52
Gm3727J3QM54 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.79□□□□□ -0.52
Gm3727J3QM54 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms