Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Gm10327-201ENSMUST00000105222 1002 ntBASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Gm27516-201ENSMUST00000184237 98 ntBASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Gm38158-201ENSMUST00000194617 339 ntBASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Cts7-204ENSMUST00000225321 1257 ntBASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 AC154462.2-201ENSMUST00000227519 370 ntBASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Gm16372-201ENSMUST00000073088 450 ntBASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcf11G3X9Z4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Gm10268-201ENSMUST00000085340 555 ntBASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcf11G3X9Z4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Gm8801-201ENSMUST00000173255 1064 ntBASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Gm37008-201ENSMUST00000195712 319 ntBASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Snora73a-201ENSMUST00000082453 205 ntBASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Gm12500-202ENSMUST00000186471 2428 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms