Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Gm8810-201ENSMUST00000172895 754 ntBASIC16.68■□□□□ 0.26
NpcdF8VQB8 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.68■□□□□ 0.26
NpcdF8VQB8 Gm37259-201ENSMUST00000193903 849 ntBASIC16.68■□□□□ 0.26
NpcdF8VQB8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.68■□□□□ 0.26
NpcdF8VQB8 Gm8598-201ENSMUST00000221184 836 ntBASIC16.68■□□□□ 0.26
NpcdF8VQB8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Cts7-204ENSMUST00000225321 1257 ntBASIC16.68■□□□□ 0.26
NpcdF8VQB8 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.68■□□□□ 0.26
NpcdF8VQB8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Snora73a-201ENSMUST00000082453 205 ntBASIC16.68■□□□□ 0.26
NpcdF8VQB8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Gm12485-201ENSMUST00000119641 291 ntBASIC16.67■□□□□ 0.26
NpcdF8VQB8 Gm11793-201ENSMUST00000120433 981 ntBASIC16.67■□□□□ 0.26
NpcdF8VQB8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.67■□□□□ 0.26
NpcdF8VQB8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Gm27682-201ENSMUST00000183930 110 ntBASIC16.67■□□□□ 0.26
NpcdF8VQB8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.67■□□□□ 0.26
NpcdF8VQB8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.67■□□□□ 0.26
NpcdF8VQB8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.66■□□□□ 0.26
NpcdF8VQB8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Gm13385-201ENSMUST00000121089 220 ntBASIC16.66■□□□□ 0.26
NpcdF8VQB8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Gm45865-201ENSMUST00000211815 945 ntBASIC16.66■□□□□ 0.26
NpcdF8VQB8 Nsd1-205ENSMUST00000224693 852 ntBASIC16.66■□□□□ 0.26
NpcdF8VQB8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Efs-202ENSMUST00000227037 2540 ntBASIC16.66■□□□□ 0.26
NpcdF8VQB8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms