Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Gm8213-201ENSMUST00000118191 441 ntBASIC16.62■□□□□ 0.25
Ube4aE9Q735 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.62■□□□□ 0.25
Ube4aE9Q735 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.62■□□□□ 0.25
Ube4aE9Q735 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.62■□□□□ 0.25
Ube4aE9Q735 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Ube4aE9Q735 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ube4aE9Q735 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm13392-201ENSMUST00000117708 150 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm12384-201ENSMUST00000119228 919 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm12403-201ENSMUST00000121384 959 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ube4aE9Q735 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.61■□□□□ 0.25
Ube4aE9Q735 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ube4aE9Q735 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.6■□□□□ 0.25
Ube4aE9Q735 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.6■□□□□ 0.25
Ube4aE9Q735 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Gm8062-201ENSMUST00000139696 444 ntBASIC16.6■□□□□ 0.25
Ube4aE9Q735 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Gm8810-201ENSMUST00000172895 754 ntBASIC16.6■□□□□ 0.25
Ube4aE9Q735 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.6■□□□□ 0.25
Ube4aE9Q735 Gm29608-201ENSMUST00000190444 463 ntBASIC16.6■□□□□ 0.25
Ube4aE9Q735 Gm43818-201ENSMUST00000200605 466 ntBASIC16.6■□□□□ 0.25
Ube4aE9Q735 Gm6007-201ENSMUST00000208170 823 ntBASIC16.6■□□□□ 0.25
Ube4aE9Q735 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.6■□□□□ 0.25
Ube4aE9Q735 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms