Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Dchs1E9PVD3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Gm13385-201ENSMUST00000121089 220 ntBASIC12.05□□□□□ -0.48
Dchs1E9PVD3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Gm25261-201ENSMUST00000157416 134 ntBASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Gm27320-201ENSMUST00000184892 109 ntBASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Dchs1E9PVD3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gm15371-201ENSMUST00000117057 784 ntBASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gm24990-201ENSMUST00000157406 323 ntBASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Itm2b-204ENSMUST00000228637 783 ntBASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gm8959-201ENSMUST00000213150 571 ntBASIC12.04□□□□□ -0.48
Dchs1E9PVD3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Dchs1E9PVD3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.03□□□□□ -0.48
Dchs1E9PVD3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Dchs1E9PVD3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Dchs1E9PVD3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Dchs1E9PVD3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Dchs1E9PVD3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Dchs1E9PVD3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Dchs1E9PVD3 Gm5687-201ENSMUST00000118252 640 ntBASIC12.03□□□□□ -0.48
Dchs1E9PVD3 Gm8566-201ENSMUST00000120174 465 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms