Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Gm6152-201ENSMUST00000151704 340 ntBASIC12.46□□□□□ -0.41
Shank1D3YZU1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Gm3786-201ENSMUST00000202659 378 ntBASIC12.46□□□□□ -0.41
Shank1D3YZU1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.46□□□□□ -0.41
Shank1D3YZU1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Shank1D3YZU1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shank1D3YZU1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shank1D3YZU1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shank1D3YZU1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shank1D3YZU1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shank1D3YZU1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shank1D3YZU1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shank1D3YZU1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shank1D3YZU1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shank1D3YZU1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shank1D3YZU1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shank1D3YZU1 Gm24526-201ENSMUST00000082921 158 ntBASIC12.46□□□□□ -0.42
Shank1D3YZU1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Shank1D3YZU1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Shank1D3YZU1 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.46□□□□□ -0.42
Shank1D3YZU1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.45□□□□□ -0.42
Shank1D3YZU1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Gm12882-201ENSMUST00000121696 517 ntBASIC12.45□□□□□ -0.42
Shank1D3YZU1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.45□□□□□ -0.42
Shank1D3YZU1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.45□□□□□ -0.42
Shank1D3YZU1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Gm12384-201ENSMUST00000119228 919 ntBASIC12.45□□□□□ -0.42
Shank1D3YZU1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Gm7584-201ENSMUST00000175829 940 ntBASIC12.45□□□□□ -0.42
Shank1D3YZU1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.45□□□□□ -0.42
Shank1D3YZU1 Gm43133-201ENSMUST00000197472 463 ntBASIC12.45□□□□□ -0.42
Shank1D3YZU1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.44□□□□□ -0.42
Shank1D3YZU1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.44□□□□□ -0.42
Shank1D3YZU1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.44□□□□□ -0.42
Shank1D3YZU1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Gm16177-201ENSMUST00000120728 718 ntBASIC12.44□□□□□ -0.42
Shank1D3YZU1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms