Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Gm42612-201ENSMUST00000197986 623 ntBASIC16.23■□□□□ 0.19
Usp42B2RQC2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Gm43170-201ENSMUST00000199827 612 ntBASIC16.23■□□□□ 0.19
Usp42B2RQC2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.23■□□□□ 0.19
Usp42B2RQC2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp42B2RQC2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Gm27437-201ENSMUST00000183429 107 ntBASIC16.22■□□□□ 0.19
Usp42B2RQC2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Gm44855-201ENSMUST00000205725 362 ntBASIC16.22■□□□□ 0.19
Usp42B2RQC2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.22■□□□□ 0.19
Usp42B2RQC2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp42B2RQC2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.21■□□□□ 0.19
Usp42B2RQC2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Gm28760-201ENSMUST00000185995 736 ntBASIC16.21■□□□□ 0.19
Usp42B2RQC2 Gm6218-201ENSMUST00000219812 628 ntBASIC16.21■□□□□ 0.19
Usp42B2RQC2 Gm2423-201ENSMUST00000074863 733 ntBASIC16.21■□□□□ 0.19
Usp42B2RQC2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp42B2RQC2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp42B2RQC2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp42B2RQC2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Usp42B2RQC2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms