Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd3B1AR17 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.6□□□□□ -0.23
Chd3B1AR17 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd3B1AR17 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd3B1AR17 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Chd3B1AR17 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd3B1AR17 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.59□□□□□ -0.23
Chd3B1AR17 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.59□□□□□ -0.23
Chd3B1AR17 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.59□□□□□ -0.23
Chd3B1AR17 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.59□□□□□ -0.23
Chd3B1AR17 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.59□□□□□ -0.23
Chd3B1AR17 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Chd3B1AR17 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Gm43433-201ENSMUST00000196573 481 ntBASIC13.59□□□□□ -0.23
Chd3B1AR17 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.59□□□□□ -0.23
Chd3B1AR17 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Chd3B1AR17 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chd3B1AR17 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd3B1AR17 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Chd3B1AR17 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Chd3B1AR17 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chd3B1AR17 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chd3B1AR17 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.58□□□□□ -0.23
Chd3B1AR17 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chd3B1AR17 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chd3B1AR17 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Chd3B1AR17 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chd3B1AR17 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chd3B1AR17 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chd3B1AR17 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.58□□□□□ -0.24
Chd3B1AR17 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.58□□□□□ -0.24
Chd3B1AR17 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.58□□□□□ -0.24
Chd3B1AR17 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chd3B1AR17 Gm9002-201ENSMUST00000178437 499 ntBASIC13.58□□□□□ -0.24
Chd3B1AR17 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Chd3B1AR17 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.58□□□□□ -0.24
Chd3B1AR17 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.58□□□□□ -0.24
Chd3B1AR17 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
Chd3B1AR17 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Chd3B1AR17 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.58□□□□□ -0.24
Chd3B1AR17 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.58□□□□□ -0.24
Chd3B1AR17 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Chd3B1AR17 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd3B1AR17 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.57□□□□□ -0.24
Chd3B1AR17 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.57□□□□□ -0.24
Chd3B1AR17 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.57□□□□□ -0.24
Chd3B1AR17 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.57□□□□□ -0.24
Chd3B1AR17 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.57□□□□□ -0.24
Chd3B1AR17 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.57□□□□□ -0.24
Chd3B1AR17 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.57□□□□□ -0.24
Chd3B1AR17 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Chd3B1AR17 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd3B1AR17 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms