Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Gm21811-201ENSMUST00000096485 930 ntBASIC7.15□□□□□ -1.27
Ubr4A2AN08 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Gm11892-201ENSMUST00000117711 1202 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm13296-201ENSMUST00000117854 997 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm12882-201ENSMUST00000121696 517 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm45120-201ENSMUST00000208880 408 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm27046-201ENSMUST00000182160 463 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 AC107763.1-201ENSMUST00000226082 1365 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm9387-201ENSMUST00000098624 1320 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm11942-201ENSMUST00000180255 345 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm29808-201ENSMUST00000194419 468 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm3332-201ENSMUST00000189337 928 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm7278-201ENSMUST00000119836 1401 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm5257-201ENSMUST00000121823 790 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Gm22388-201ENSMUST00000158194 248 ntBASIC7.14□□□□□ -1.27
Ubr4A2AN08 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ubr4A2AN08 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Ubr4A2AN08 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ubr4A2AN08 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ubr4A2AN08 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ubr4A2AN08 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ubr4A2AN08 Gm6506-201ENSMUST00000119775 1136 ntBASIC7.13□□□□□ -1.27
Ubr4A2AN08 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC7.13□□□□□ -1.27
Ubr4A2AN08 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ubr4A2AN08 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ubr4A2AN08 Gm38135-201ENSMUST00000195068 502 ntBASIC7.13□□□□□ -1.27
Ubr4A2AN08 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC7.13□□□□□ -1.27
Ubr4A2AN08 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ubr4A2AN08 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ubr4A2AN08 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ubr4A2AN08 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms