Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv29A0A0G2LB96 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Gm11025-201ENSMUST00000140773 466 ntBASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 AA619741-201ENSMUST00000195095 646 ntBASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 BC001981-202ENSMUST00000191393 1545 ntBASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv29A0A0G2LB96 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 AA543401-201ENSMUST00000164248 1269 ntBASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trbv29A0A0G2LB96 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv29A0A0G2LB96 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trbv29A0A0G2LB96 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv29A0A0G2LB96 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv29A0A0G2LB96 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trbv29A0A0G2LB96 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trbv29A0A0G2LB96 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv29A0A0G2LB96 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trbv29A0A0G2LB96 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms