Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm18856-201ENSMUST00000178096 1374 ntBASIC10.52□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms