Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm29741-201ENSMUST00000192667 421 ntBASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
H2afb2S4R1M3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
H2afb2S4R1M3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.96□□□□□ -0.18
H2afb2S4R1M3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
H2afb2S4R1M3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Gm2445-201ENSMUST00000182798 989 ntBASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.95□□□□□ -0.18
H2afb2S4R1M3 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
H2afb2S4R1M3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Gm15460-201ENSMUST00000118147 391 ntBASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Gm9229-201ENSMUST00000222777 126 ntBASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.94□□□□□ -0.18
H2afb2S4R1M3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms