Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CcsQ9WU84 Gm11779-201ENSMUST00000118541 368 ntBASIC10.85□□□□□ -0.67
CcsQ9WU84 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.85□□□□□ -0.67
CcsQ9WU84 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.85□□□□□ -0.67
CcsQ9WU84 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.85□□□□□ -0.67
CcsQ9WU84 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.85□□□□□ -0.67
CcsQ9WU84 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CcsQ9WU84 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
CcsQ9WU84 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.85□□□□□ -0.67
CcsQ9WU84 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.85□□□□□ -0.67
CcsQ9WU84 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CcsQ9WU84 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CcsQ9WU84 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CcsQ9WU84 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcsQ9WU84 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.84□□□□□ -0.67
CcsQ9WU84 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.84□□□□□ -0.67
CcsQ9WU84 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.84□□□□□ -0.67
CcsQ9WU84 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.84□□□□□ -0.67
CcsQ9WU84 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcsQ9WU84 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.84□□□□□ -0.67
CcsQ9WU84 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CcsQ9WU84 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms