Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Gm10253-201ENSMUST00000194270 940 ntBASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Gm29541-201ENSMUST00000191351 678 ntBASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a2Q9JLR1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Mir6956-201ENSMUST00000183598 62 ntBASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Gm18049-201ENSMUST00000208909 581 ntBASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a2Q9JLR1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms