Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ldb3Q9JKS4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Gm14719-201ENSMUST00000121891 340 ntBASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ldb3Q9JKS4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Gm13385-201ENSMUST00000121089 220 ntBASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Gm8927-201ENSMUST00000181978 981 ntBASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Gm27838-201ENSMUST00000184829 128 ntBASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Gm29667-201ENSMUST00000190817 490 ntBASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Gm5425-201ENSMUST00000214125 459 ntBASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Gm3222-201ENSMUST00000071282 990 ntBASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ldb3Q9JKS4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms