Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssu72Q9CY97 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Gm12350-201ENSMUST00000121208 462 ntBASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Gm18737-201ENSMUST00000173594 937 ntBASIC13.84□□□□□ -0.19
Ssu72Q9CY97 AA619741-201ENSMUST00000195095 646 ntBASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssu72Q9CY97 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Ssu72Q9CY97 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Ssu72Q9CY97 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.83□□□□□ -0.2
Ssu72Q9CY97 AA543401-201ENSMUST00000164248 1269 ntBASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Mir5131-201ENSMUST00000175426 93 ntBASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Ssu72Q9CY97 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms