Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.33□□□□□ -0.11
Ddx47Q9CWX9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx47Q9CWX9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx47Q9CWX9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Gm2445-201ENSMUST00000182798 989 ntBASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ddx47Q9CWX9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Gm13597-201ENSMUST00000121239 375 ntBASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Birc2-201ENSMUST00000054878 378 ntBASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx47Q9CWX9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx47Q9CWX9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx47Q9CWX9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms