Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smc3Q9CW03 AA619741-201ENSMUST00000195095 646 ntBASIC16.39■□□□□ 0.21
Smc3Q9CW03 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.39■□□□□ 0.21
Smc3Q9CW03 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.39■□□□□ 0.21
Smc3Q9CW03 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.39■□□□□ 0.21
Smc3Q9CW03 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.39■□□□□ 0.21
Smc3Q9CW03 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc3Q9CW03 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 AA543401-201ENSMUST00000164248 1269 ntBASIC16.38■□□□□ 0.21
Smc3Q9CW03 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.38■□□□□ 0.21
Smc3Q9CW03 Gm5264-201ENSMUST00000190584 848 ntBASIC16.38■□□□□ 0.21
Smc3Q9CW03 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc3Q9CW03 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.37■□□□□ 0.21
Smc3Q9CW03 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Gm2445-201ENSMUST00000182798 989 ntBASIC16.37■□□□□ 0.21
Smc3Q9CW03 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.37■□□□□ 0.21
Smc3Q9CW03 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.37■□□□□ 0.21
Smc3Q9CW03 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.37■□□□□ 0.21
Smc3Q9CW03 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smc3Q9CW03 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc3Q9CW03 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.36■□□□□ 0.21
Smc3Q9CW03 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.36■□□□□ 0.21
Smc3Q9CW03 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Gm13015-201ENSMUST00000118674 204 ntBASIC16.36■□□□□ 0.21
Smc3Q9CW03 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Gm27494-201ENSMUST00000184735 189 ntBASIC16.36■□□□□ 0.21
Smc3Q9CW03 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.36■□□□□ 0.21
Smc3Q9CW03 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms