Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.62■□□□□ 0.09
Smc1aQ9CU62 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Gm7730-201ENSMUST00000212486 454 ntBASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Gm9063-201ENSMUST00000223299 582 ntBASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc1aQ9CU62 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc1aQ9CU62 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Gm27680-201ENSMUST00000184192 160 ntBASIC15.59■□□□□ 0.09
Smc1aQ9CU62 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.59■□□□□ 0.09
Smc1aQ9CU62 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms