Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39lQ9CQD0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39lQ9CQD0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39lQ9CQD0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Gm10729-202ENSMUST00000193403 1375 ntBASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Gm18489-201ENSMUST00000172565 551 ntBASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Gm17808-201ENSMUST00000200859 894 ntBASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39lQ9CQD0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Tcf21-202ENSMUST00000218002 1788 ntBASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Gm44414-201ENSMUST00000203660 2109 ntBASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Gm42829-201ENSMUST00000198417 2585 ntBASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39lQ9CQD0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms