Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.53□□□□□ -0.24
Rnf111Q99ML9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf111Q99ML9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
Rnf111Q99ML9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf111Q99ML9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf111Q99ML9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf111Q99ML9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf111Q99ML9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.52□□□□□ -0.25
Rnf111Q99ML9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rnf111Q99ML9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Gm43474-201ENSMUST00000196415 774 ntBASIC13.51□□□□□ -0.25
Rnf111Q99ML9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms