Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Gm7584-201ENSMUST00000175829 940 ntBASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Gm24420-201ENSMUST00000176676 59 ntBASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Mir8109-201ENSMUST00000184375 117 ntBASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Gm38223-201ENSMUST00000194484 695 ntBASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Gm27772-201ENSMUST00000184900 187 ntBASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx6-1Q99MA9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx6-1Q99MA9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx6-1Q99MA9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx6-1Q99MA9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Nkx6-1Q99MA9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx6-1Q99MA9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.02□□□□□ -0.32
Nkx6-1Q99MA9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx6-1Q99MA9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx6-1Q99MA9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.02□□□□□ -0.32
Nkx6-1Q99MA9 Gm15236-201ENSMUST00000117309 379 ntBASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Gm8810-201ENSMUST00000172895 754 ntBASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx6-1Q99MA9 Gm37466-201ENSMUST00000195692 652 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms