Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Gm27631-201ENSMUST00000184163 466 ntBASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.49□□□□□ -0.25
Cstf3Q99LI7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm22065-201ENSMUST00000103753 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm22066-201ENSMUST00000103761 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm24932-201ENSMUST00000103763 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm24115-201ENSMUST00000103799 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm22190-201ENSMUST00000103827 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm22191-201ENSMUST00000103831 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm24721-201ENSMUST00000103849 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm28018-201ENSMUST00000103869 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm26399-201ENSMUST00000103937 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm11594-201ENSMUST00000122313 162 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm25349-201ENSMUST00000177728 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm23616-201ENSMUST00000177797 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm25871-201ENSMUST00000177816 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm24752-201ENSMUST00000178240 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm24496-201ENSMUST00000178287 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm25649-201ENSMUST00000178476 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm25548-201ENSMUST00000178681 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm23147-201ENSMUST00000178841 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm26095-201ENSMUST00000179270 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm22171-201ENSMUST00000179283 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm23936-201ENSMUST00000179354 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm22619-201ENSMUST00000179516 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm25255-201ENSMUST00000179579 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm24755-201ENSMUST00000179691 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm26506-201ENSMUST00000179692 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm25086-201ENSMUST00000179931 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm23243-201ENSMUST00000180047 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm24659-201ENSMUST00000180212 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm24169-201ENSMUST00000180244 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm23689-201ENSMUST00000180354 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm27359-201ENSMUST00000184153 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm27785-201ENSMUST00000184268 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm27466-201ENSMUST00000184396 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm27703-201ENSMUST00000184836 110 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf3Q99LI7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms