Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Gm44608-201ENSMUST00000206827 855 ntBASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Gm7775-201ENSMUST00000218871 853 ntBASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha3Q91Y16 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha3Q91Y16 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha3Q91Y16 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.58□□□□□ -0.07
Pcdha3Q91Y16 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha3Q91Y16 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha3Q91Y16 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Gm12428-201ENSMUST00000119844 727 ntBASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha3Q91Y16 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Gm12151-201ENSMUST00000121374 290 ntBASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha3Q91Y16 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha3Q91Y16 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms