Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Gm7774-201ENSMUST00000200064 533 ntBASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Gm5312-201ENSMUST00000203728 547 ntBASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Gm5779-201ENSMUST00000218467 910 ntBASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb8Q91XZ2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pcdhb8Q91XZ2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Dupd1-202ENSMUST00000224735 548 ntBASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdhb8Q91XZ2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Gm37935-201ENSMUST00000192012 982 ntBASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb8Q91XZ2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms