Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Gm5523-201ENSMUST00000180415 997 ntBASIC16.18■□□□□ 0.18
StrcQ8VIM6 Gm28450-201ENSMUST00000187349 638 ntBASIC16.18■□□□□ 0.18
StrcQ8VIM6 Gm13097-201ENSMUST00000210722 397 ntBASIC16.18■□□□□ 0.18
StrcQ8VIM6 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
StrcQ8VIM6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm45770-201ENSMUST00000212105 616 ntBASIC16.17■□□□□ 0.18
StrcQ8VIM6 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
StrcQ8VIM6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm13875-201ENSMUST00000120162 282 ntBASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm13461-201ENSMUST00000120980 662 ntBASIC16.17■□□□□ 0.18
StrcQ8VIM6 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm26956-201ENSMUST00000182176 986 ntBASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.17■□□□□ 0.18
StrcQ8VIM6 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
StrcQ8VIM6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.16■□□□□ 0.18
StrcQ8VIM6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.16■□□□□ 0.18
StrcQ8VIM6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Mir1943-201ENSMUST00000158276 73 ntBASIC16.16■□□□□ 0.18
StrcQ8VIM6 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.16■□□□□ 0.18
StrcQ8VIM6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.16■□□□□ 0.18
StrcQ8VIM6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.16■□□□□ 0.18
StrcQ8VIM6 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.16■□□□□ 0.18
StrcQ8VIM6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
StrcQ8VIM6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
StrcQ8VIM6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
StrcQ8VIM6 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
StrcQ8VIM6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
StrcQ8VIM6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
StrcQ8VIM6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
StrcQ8VIM6 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms