Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Mir125a-201ENSMUST00000083545 68 ntBASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H1fooQ8VIK3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm22065-201ENSMUST00000103753 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm22066-201ENSMUST00000103761 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm24932-201ENSMUST00000103763 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm24115-201ENSMUST00000103799 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm22190-201ENSMUST00000103827 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm22191-201ENSMUST00000103831 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm24721-201ENSMUST00000103849 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm28018-201ENSMUST00000103869 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm26399-201ENSMUST00000103937 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm9719-201ENSMUST00000162765 543 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm25349-201ENSMUST00000177728 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm23616-201ENSMUST00000177797 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm25871-201ENSMUST00000177816 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm24752-201ENSMUST00000178240 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm24496-201ENSMUST00000178287 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm25649-201ENSMUST00000178476 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm25548-201ENSMUST00000178681 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm23147-201ENSMUST00000178841 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm26095-201ENSMUST00000179270 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm22171-201ENSMUST00000179283 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm23936-201ENSMUST00000179354 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm22619-201ENSMUST00000179516 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm25255-201ENSMUST00000179579 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm24755-201ENSMUST00000179691 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm26506-201ENSMUST00000179692 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm25086-201ENSMUST00000179931 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm23243-201ENSMUST00000180047 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm24659-201ENSMUST00000180212 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm24169-201ENSMUST00000180244 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm23689-201ENSMUST00000180354 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm27359-201ENSMUST00000184153 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm27785-201ENSMUST00000184268 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm27466-201ENSMUST00000184396 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm27703-201ENSMUST00000184836 110 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
H1fooQ8VIK3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms