Protein–RNA interactions for Protein: Q8VE37

Rcc1, Regulator of chromosome condensation, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcc1Q8VE37 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rcc1Q8VE37 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rcc1Q8VE37 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rcc1Q8VE37 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rcc1Q8VE37 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rcc1Q8VE37 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rcc1Q8VE37 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rcc1Q8VE37 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rcc1Q8VE37 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rcc1Q8VE37 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gm12882-201ENSMUST00000121696 517 ntBASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gm25911-201ENSMUST00000157621 56 ntBASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gm38225-201ENSMUST00000194001 393 ntBASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rcc1Q8VE37 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Rprl2-201ENSMUST00000157150 290 ntBASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Gm8000-201ENSMUST00000188378 592 ntBASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rcc1Q8VE37 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms