Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Slf1Q8R3P9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Gm18733-201ENSMUST00000173950 856 ntBASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slf1Q8R3P9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.06□□□□□ -0.16
Slf1Q8R3P9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Slf1Q8R3P9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms