Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Gm13392-201ENSMUST00000117708 150 ntBASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Gm18473-201ENSMUST00000220543 868 ntBASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp7Q8R1T1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Gm8584-201ENSMUST00000171982 758 ntBASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Gm37424-201ENSMUST00000191727 561 ntBASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Gm24447-201ENSMUST00000083977 338 ntBASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp7Q8R1T1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Gm24644-201ENSMUST00000157114 139 ntBASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Gm17420-201ENSMUST00000164753 153 ntBASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Gm10478-201ENSMUST00000084451 396 ntBASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp7Q8R1T1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms