Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Gm5354-201ENSMUST00000182417 973 ntBASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpp40Q8R1F9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Gm37917-201ENSMUST00000194711 392 ntBASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpp40Q8R1F9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms