Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Mospd4-201ENSMUST00000180618 576 ntBASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Gm9755-201ENSMUST00000032981 1356 ntBASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 BC037039-201ENSMUST00000192003 2205 ntBASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Gm12715-201ENSMUST00000121430 1128 ntBASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 n-R5s195-201ENSMUST00000082891 119 ntBASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx54Q8K4L0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 Gm45684-201ENSMUST00000210244 1571 ntBASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx54Q8K4L0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 Gm11618-201ENSMUST00000117946 267 ntBASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 AU022133-201ENSMUST00000200601 873 ntBASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.08■□□□□ 0.48
Ddx54Q8K4L0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Gm11591-201ENSMUST00000120063 702 ntBASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Gm14017-201ENSMUST00000121934 386 ntBASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Gm29741-201ENSMUST00000192667 421 ntBASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC18.07■□□□□ 0.48
Ddx54Q8K4L0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms