Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Gm45098-201ENSMUST00000207179 657 ntBASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf4Q8K4J2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf4Q8K4J2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ebf4Q8K4J2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf4Q8K4J2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf4Q8K4J2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf4Q8K4J2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf4Q8K4J2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf4Q8K4J2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf4Q8K4J2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf4Q8K4J2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Ebf4Q8K4J2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf4Q8K4J2 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms