Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trnt1Q8K1J6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.52□□□□□ -0.24
Trnt1Q8K1J6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Trnt1Q8K1J6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trnt1Q8K1J6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trnt1Q8K1J6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Gm27618-201ENSMUST00000183671 60 ntBASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Gm29741-201ENSMUST00000192667 421 ntBASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Gm9229-201ENSMUST00000222777 126 ntBASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnt1Q8K1J6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Gm15460-201ENSMUST00000118147 391 ntBASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Gm46209-201ENSMUST00000217912 553 ntBASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.5□□□□□ -0.25
Trnt1Q8K1J6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms