Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Mir7654-201ENSMUST00000185082 70 ntBASIC16.22■□□□□ 0.19
Alx1Q8C8B0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Alx1Q8C8B0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Alx1Q8C8B0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.21■□□□□ 0.18
Alx1Q8C8B0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Alx1Q8C8B0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Alx1Q8C8B0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Alx1Q8C8B0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Alx1Q8C8B0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Alx1Q8C8B0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Mir6392-201ENSMUST00000184924 108 ntBASIC16.2■□□□□ 0.18
Alx1Q8C8B0 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.2■□□□□ 0.18
Alx1Q8C8B0 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.2■□□□□ 0.18
Alx1Q8C8B0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Gm5161-201ENSMUST00000075243 853 ntBASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Alx1Q8C8B0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Gm12485-201ENSMUST00000119641 291 ntBASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Gm18018-201ENSMUST00000198273 408 ntBASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms