Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Matn2-206ENSMUST00000228570 2798 ntBASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim9Q8C7M3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Mir698-201ENSMUST00000102164 109 ntBASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Gm12585-201ENSMUST00000117307 290 ntBASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Gm10766-202ENSMUST00000194123 606 ntBASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Gm5867-201ENSMUST00000063197 592 ntBASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.36■□□□□ 0.05
Trim9Q8C7M3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim9Q8C7M3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Mir6956-201ENSMUST00000183598 62 ntBASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms