Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gm29424-201ENSMUST00000189716 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm28599-201ENSMUST00000189838 694 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21867-201ENSMUST00000189917 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm29269-201ENSMUST00000190087 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21722-201ENSMUST00000190153 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm28423-201ENSMUST00000190701 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21899-201ENSMUST00000190745 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21910-201ENSMUST00000191163 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21849-201ENSMUST00000191571 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm28678-201ENSMUST00000191593 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm20910-201ENSMUST00000193268 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21871-201ENSMUST00000194621 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 AA543401-201ENSMUST00000164248 1269 ntBASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smim4Q8C1Q6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Gm6222-201ENSMUST00000120787 396 ntBASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms