Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Gm44608-201ENSMUST00000206827 855 ntBASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Gm13223-201ENSMUST00000118609 747 ntBASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf3Q8C120 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Gm27430-201ENSMUST00000184585 107 ntBASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Gm44333-201ENSMUST00000197168 107 ntBASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Gm6888-201ENSMUST00000221983 706 ntBASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf3Q8C120 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Sh3rf3Q8C120 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf3Q8C120 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.52□□□□□ -0.08
Sh3rf3Q8C120 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf3Q8C120 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sh3rf3Q8C120 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf3Q8C120 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf3Q8C120 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Sh3rf3Q8C120 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf3Q8C120 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf3Q8C120 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf3Q8C120 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms