Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm42872-201ENSMUST00000200026 1967 ntBASIC19.57■□□□□ 0.72
Usp47Q8BY87 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Gm16342-201ENSMUST00000124025 1025 ntBASIC19.57■□□□□ 0.72
Usp47Q8BY87 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Gm6983-201ENSMUST00000214912 628 ntBASIC19.57■□□□□ 0.72
Usp47Q8BY87 Gm5035-201ENSMUST00000215581 927 ntBASIC19.57■□□□□ 0.72
Usp47Q8BY87 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC19.56■□□□□ 0.72
Usp47Q8BY87 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC19.56■□□□□ 0.72
Usp47Q8BY87 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Gm8775-201ENSMUST00000170943 1327 ntBASIC19.56■□□□□ 0.72
Usp47Q8BY87 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp47Q8BY87 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp47Q8BY87 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm11478-201ENSMUST00000117851 599 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm12537-201ENSMUST00000119266 1002 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm12070-201ENSMUST00000119551 1002 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm12671-201ENSMUST00000119978 1002 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm13292-201ENSMUST00000120014 1000 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm15806-201ENSMUST00000120696 955 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm12403-201ENSMUST00000121384 959 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm10359-201ENSMUST00000180167 1002 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm12033-201ENSMUST00000180654 1002 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm5559-201ENSMUST00000180755 1002 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm4335-201ENSMUST00000182581 1004 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Gm17870-201ENSMUST00000219489 1174 ntBASIC19.55■□□□□ 0.72
Usp47Q8BY87 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp47Q8BY87 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Gm44719-201ENSMUST00000206404 149 ntBASIC19.54■□□□□ 0.72
Usp47Q8BY87 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.54■□□□□ 0.72
Usp47Q8BY87 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp47Q8BY87 AL645783.1-201ENSMUST00000221416 1832 ntBASIC19.53■□□□□ 0.72
Usp47Q8BY87 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp47Q8BY87 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Usp47Q8BY87 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp47Q8BY87 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms