Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ube3dQ8BX13 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ube3dQ8BX13 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ube3dQ8BX13 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.41□□□□□ -0.42
Ube3dQ8BX13 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ube3dQ8BX13 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ube3dQ8BX13 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ube3dQ8BX13 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ube3dQ8BX13 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Gm9719-201ENSMUST00000162765 543 ntBASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Gm27306-201ENSMUST00000183970 107 ntBASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Gm27989-201ENSMUST00000184721 107 ntBASIC12.4□□□□□ -0.42
Ube3dQ8BX13 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Ube3dQ8BX13 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.4□□□□□ -0.43
Ube3dQ8BX13 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ube3dQ8BX13 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ube3dQ8BX13 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ube3dQ8BX13 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ube3dQ8BX13 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ube3dQ8BX13 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Gm5566-201ENSMUST00000116118 459 ntBASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Gm14767-201ENSMUST00000121559 586 ntBASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.39□□□□□ -0.43
Ube3dQ8BX13 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms