Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Gm5279-201ENSMUST00000199575 745 ntBASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup54Q8BTS4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms