Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Gm27622-201ENSMUST00000183779 60 ntBASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4Q8BQZ5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Gm8584-201ENSMUST00000171982 758 ntBASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cpsf4Q8BQZ5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4Q8BQZ5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4Q8BQZ5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Cpsf4Q8BQZ5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4Q8BQZ5 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.52□□□□□ -0.24
Cpsf4Q8BQZ5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.52□□□□□ -0.24
Cpsf4Q8BQZ5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cpsf4Q8BQZ5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4Q8BQZ5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4Q8BQZ5 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4Q8BQZ5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Gm8410-201ENSMUST00000117225 605 ntBASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Gm20949-201ENSMUST00000206478 952 ntBASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms